CDS
| Accession Number | TCMCG057C42560 |
| gbkey | CDS |
| Protein Id | XP_018445487.1 |
| Location | join(26648452..26650483,26650587..26651406,26651514..26652012) |
| Gene | LOC108817325 |
| GeneID | 108817325 |
| Organism | Raphanus sativus |
Protein
| Length | 1116aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA344915 |
| db_source | XM_018589985.1 |
| Definition | PREDICTED: phytochrome C [Raphanus sativus] |
EGGNOG-MAPPER Annotation
| COG_category | T |
| Description | Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] |
| KEGG_ko |
ko:K12120
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko04712
[VIEW IN KEGG] map04712 [VIEW IN KEGG] |
| GOs | - |
Sequence
| CDS: ATGTCATCAGGTAGCAATTCTGGAAGCTGTTCAAGTCGATCCAGAAACAACAACTCTCGAGTTACTTCACAAGTCCTCGCTGATGCAAAGCTCCACGGGAAATTCGAGGAATCCGCGCGATTATTCGACTACTCAGCTTCAATTAACGTGAACATGCCGACCGACGACATCCCTTCTTCTTCAGATGTCTCAGCTTACTTACACAAGATTCAGAGAGGGATGTTGATTCAGCCCTTTGGTTGCTTAATCGTTGTTGATGACAGAACCCTCAAAGTAATTGCCTTCAGTGAGAACACACAAGAGATGTTGGGTTTGACTCCACATACTGTCCCAAGTATGGAGCAACGTAGTGAAGCAGCAGCTCTGAGTATTGGTACTGATGTGCGATCACTGTTTCAGTCTCAAGCTTCTTCTGCGTTGCAGAAAGCTGCTGACTTTGGTGAGATTAGTATTCTGAATCCTATCACGCTTCACTGCAGGACTTCAGGTAAGCCTTTTTATGCCATCCTCCATCGTATTGAACAAGGTCTTGTTATTGATTTGGAGCCTGTGAGTCCTGATGAGGTGCCAGTGACTGCTGCTGGTGCCTTGAAATCATACAAGCTCGCTGCTAAGTCCATTTCGAGGTTGCAGGGGTTGCCTAGTGGGAATATGTCCTTGCTCTGTGATGCTTTAGTCAAGGAAGTTAGTGAGTTAACCGGTTACGATAGGGTGATGGTTTATAAGTTCCATGAAGATGGGCATGGCGAAGTGATTGCTGAGTGCTGTAAGGTAGACTTGGAACCTTATCTTGGCTTGCATTACTCCGCTACTGATATACCACAAGCCTCTAGATATCTCTTTATGAGAAACAAGGTTAGGATGATTTGTGATTGTTCGTCTGTTCCAGTTAAAGTAGTCCAGGACAAGAGTCTCTCACAGCCGATTAGTCTCTTTGGATCTACTCTGAGAGCTCCTCATGGTTGTCACGCACAGTACATGAGTAATATGGGCTCAGTGGCATCTCTTGTTATGTCCGTAACAATCAATGGTAGTGGTAATGATGAAATGAACAGAGATTTACAGACAGGCAGAACCTTATGGGGGTTAGTGGTTTGTCATCACGCAAGTCCCAGGGTCGTCCCGTTTCCTCTGAGATATGCCTGTGAGTTCTTGACTCAGGTGTTTGGCGTGCAGATCAACAAGGAAGCGGAATCAGCTCTTCTGTTGAAAGAGAAGCGTATTCTGCAAACTCAGAGTGTGCTATGTGACATGCTTTTTCGCAATGCACCTATAGGTATAGTCACTCAGTCTCCAAATATAATGGATCTTGTTAAATGTGATGGAGCAGCTCTTTATTACAGAGATAAGCTCTGGTCTTTAGGGGTTACTCCTACAGAGACACAAATTAGAGATATAATCGATTGGGTTCTCAAAATTCAAGGAGGAAACAGTGGCTTTACCACTGAAAGTCTAATGGAGGCTGGCTATCCGGATGCTTCCGTCCTCGGGGAGTCAATCTGTGGAATGGCTGCCGTACATATAACCCAAAAGGTATTCCTTTTCTGGTTCCGGTCTGGCACTGCAAAACAGATCAAGTGGGGTGGTGCAAGACATGATCCTGATGACAGAGATGGTAAAAGGATGCATCCTAGATCCTCGTTCAAGGCTTTTATGGAGATAGTCCGGTGGAAAAGTATGCCCTGGGATGACATGGAAATGGATGCAATCAATTCTCTGCAGCTGATAATAAAAGGTTCATTGCAAGAGGAGCATCCAGAGACTGTTGTGGATGTGCCGTTTGTGGATAATAATAGAGTCCAGAAGGTGGATGAAATGTGTGTTATTGTGAACGAAATGGTGCGCTTGATTGACACAGCTGCTGTTCCGATCTTTGCAGTTGATGCCTCTGGTGTTATAAACGGTTGGAATTCAAAAGCGGCTGAGGTGACTGGATTGGCTGTTGAACAAGCAATAGGCAAACCTGTATCAGATATCGTTGAAGATGATTCTGCAATAACCATTAAGAACATGTTAGCATTGGCTCTCCAAGGTAGCGAAGAACGTGGCGCCGAGATCAGGATCAGAGCATTTGGTCCTAAAAGGAAAAGCAGTCCTATTGAATTAGTCGTCAACACTTGCTGTAGCAGAGATACAAGGAATAATGTTCTTGGTGTGTGCTTCATTGGACAAGATGTTACAGGCCAGAAGACGCTTATTGAGAAGTATAGCCGCGTGCAAGGAGATTACGCCAGAATCATGTGGAGCCCTTCAACACTGATCCCACCAATTTTTATGACCACCGAGAATGGGTTATGCTCAGAGTGGAATGACGCCATGCAGAAGCTCTCTGGTATAAAGAGAGAAGAAGCTGTCAATAGAATGCTTCTTGGAGAGGTTTTCACCTCAAATGATTCATGCTGTCGCCTTCAAGACCATGACACGTTAATTAAACTCAGAATAGCTTTAAATGCTGTGAGTTCTGGCCAGGATAACATAGAGAAGCTTTTGTTTGGCTTCTACCATCGTGATGGTAGCTTCATCGAGGCATTGCTTTCGGCAAACAAAAGGACTGATATCGAGGGAAAAGTTACAGGGGTTTTATGCTTTCTGCAAGTACCTAGTCCAGAACTCCAATACGCTCTACAGGTTCAGCGAATATCAGAGCAGGCAGTGGCCTGCGCTGTCAATAAGATGGCATATCTCCGCCAACAAGTGGCGAATCCAGAAAAAGCAATATCCTTGCTTCAAGATTTTCTACATTCATCTGGATTAAATGAAGAACAAAAGCAGCTCCTGAGTACAAGCGTGTCATGCAGGGAGCAGTTAGCCAAAGTCATAAGCGACTCAGACATAGAGGGAATCGAGGATGGGTATGTGCAGCTGGGTTGCAGCGAATTCAGCCTTGAGGAATCCCTGGAAGCAGTTGTAAAACAAGTGATGGAGCTGAGCATAGAACGTAAAGTGCAGATTATCTGCGATTATCCTCACGAAGTTTCGTTAATGAGACTGTATGGAGATTCCTTAAGGCTTCAGCAAATCCTTGCAGAGACACTCTCAAGCAGCATACGGTTCACTTCTGCATTGAAGGGGTTGTGCGTATCATTTAAGGTAATGTCACGGATAGAAGCTATAGGGAAAAGAATGAAGAGAGTGGAGCTAGAGTTCAGGATAATACACCCGGCACCGGGACTGCCTGATGATCTGGTACGAGAGATGTTTCAGCCTTTAAGGAAAGATACATCTAGGGAAGGCTTGGGACTACACATAACACAGAAGCTAGTAAAACTAATGGAGGGAGGAACGTTGAGATACTTGAGAGAATCGGAAATGTCAGCTTTTGTGATCCTCGCAGAATTTCCATTGATTTAA |
| Protein: MSSGSNSGSCSSRSRNNNSRVTSQVLADAKLHGKFEESARLFDYSASINVNMPTDDIPSSSDVSAYLHKIQRGMLIQPFGCLIVVDDRTLKVIAFSENTQEMLGLTPHTVPSMEQRSEAAALSIGTDVRSLFQSQASSALQKAADFGEISILNPITLHCRTSGKPFYAILHRIEQGLVIDLEPVSPDEVPVTAAGALKSYKLAAKSISRLQGLPSGNMSLLCDALVKEVSELTGYDRVMVYKFHEDGHGEVIAECCKVDLEPYLGLHYSATDIPQASRYLFMRNKVRMICDCSSVPVKVVQDKSLSQPISLFGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSGNDEMNRDLQTGRTLWGLVVCHHASPRVVPFPLRYACEFLTQVFGVQINKEAESALLLKEKRILQTQSVLCDMLFRNAPIGIVTQSPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDIIDWVLKIQGGNSGFTTESLMEAGYPDASVLGESICGMAAVHITQKVFLFWFRSGTAKQIKWGGARHDPDDRDGKRMHPRSSFKAFMEIVRWKSMPWDDMEMDAINSLQLIIKGSLQEEHPETVVDVPFVDNNRVQKVDEMCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDIVEDDSAITIKNMLALALQGSEERGAEIRIRAFGPKRKSSPIELVVNTCCSRDTRNNVLGVCFIGQDVTGQKTLIEKYSRVQGDYARIMWSPSTLIPPIFMTTENGLCSEWNDAMQKLSGIKREEAVNRMLLGEVFTSNDSCCRLQDHDTLIKLRIALNAVSSGQDNIEKLLFGFYHRDGSFIEALLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQRISEQAVACAVNKMAYLRQQVANPEKAISLLQDFLHSSGLNEEQKQLLSTSVSCREQLAKVISDSDIEGIEDGYVQLGCSEFSLEESLEAVVKQVMELSIERKVQIICDYPHEVSLMRLYGDSLRLQQILAETLSSSIRFTSALKGLCVSFKVMSRIEAIGKRMKRVELEFRIIHPAPGLPDDLVREMFQPLRKDTSREGLGLHITQKLVKLMEGGTLRYLRESEMSAFVILAEFPLI |